Small Built-In PBMC Seurat Object

A compact Seurat object sampled from the package PBMC example assets. The object combines cells from pbmc1k and pbmc3k and includes sample-level metadata, so examples can demonstrate both single-sample and multi-sample workflows without a network download.

Usage

pbmc_small

Format

A Seurat object with filtered counts and metadata columns including sample, source_dataset, and source_barcode.

Source

Derived during development from the Zenodo-backed pbmc1k and pbmc3k example datasets via data-raw/build_shennong_example_data.R.